2024年

1. 髙山佳樹・古閑伸一・戸田龍樹 (2024). 海産カイアシ類Pseusodiaptomus nihonkaiensisの培養における微細藻類餌料の検討. Bulletin of Plankton Eco-Engineering Research, 4: 42-49.
   

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3. Koga S., Y. Takayama and T. Toda (2024). Can the culture density of the marine copepod Pseudodiaptomus nihonkaienssis be improved by installing an artificial substrate? Aquaculture Studies, 24: AQUAST1879.
   

2023年

1. Sugai, Y., N. Natori, K. Tsuchiya, M. Nakagawa, M. C. Honda, S. Shimode and T. Toda (2023). Ingestion rate estimated from food concentration and predatory role of copepod nauplii in the microbial food web of temperate embayment waters. Journal of Plankton Research, 45: 325-337.
   

2. 
   

3. Takayama, Y., T. Yamasaki and T. Toda (2023). Evaluation of microalgal diet to culture adult Oithona oculata Farran (Copepoda, Cyclopoida). Aquaculture Research, 2023: 1-7.
   

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5. Nonomura, T., J. Nishikawa and S. Nishida (2023). Seasonal changes in the vertical distribution and population structure of Calanus sinicusand and Calanus jashnovi (Copepoda: Calanoida) in Sagami Bay, Japan. Journal of Oceanography, 79: 295-315.
   

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7. 髙山佳樹 (2023) 海産浮遊性カイアシ類の大量培養. Bulletin of Plankton Eco-Engineering Research, 3: 1-18.
   

8. 
   

9. 矢野光一・梶正彦・下出信次・Victor S. Kuwahara (2023) 温帯沿岸域相模湾における植物プランクトンのサイズ組成と光吸収係数の特徴. Bulletin of Plankton Eco-Engineering Research, 3: 39-46.
   

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11. Fujii, M., Y. Takayama, Y. Imaizumi, M.Y. Fatimah, Y. Yago, N. Nagao, F. Wahab and T. Toda (2023) Energy-saving fucoxanthin production of Chaetoceros gracilis in a flat bag reactor with intermittent mixing. Biocatalysis and Agricultural Biotechnology, 50: 102693.
    

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13. Takayama, Y., F.M. Yusoff and T. Toda (2023). Evaluation of dietary microalgae in the culture of the Acartia steueri (Copepoda, Calanoida). Journal of Sustainability Science and Management, 18: 186-198.
    

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15. Nakamura, Y., H. Itagaki, A. Tuji, S. Shimode, A. Yamaguchi, K. Hidaka.and E. Ogiso-Tanaka (2023). DNA metabarcoding focused on difficult-to-culture protists: An effective approach to clarify biological interactions. Environmental Microbiology, 25: 3630-3638.
    

2022年

1. Sogawa, S., K. Tsuchiya, S. Nagai, S. Shimode and V.S. Kuwahara (2022). Annual dynamics of eukaryotic and bacterial communities revealed by 18S and 16S rRNA metabarcoding in the coastal ecosystem of Sagami Bay, Japan. Metabarcoding and Metagenomics, 6: 41-58.
   

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3. Fujimaki, R., N. Suzuki, K. Kimoto, Y. Nagai, Y. Oaki, S. Shimode, T. Toyofuku and H. Imai (2022). Micro- and nanometric characterization of the celestite skeleton of acantharian species (Radiolaria, Rhizaria). Scientific Report, 12: 2848.
   

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6. Koga S., Y. Takayama and T. Toda (2022). Suppression of cannibalism in the intertidal copepod Tigriopus japonicus (Mori, 1932) and improvements in population density using artificial substrates. Aquaculture, Fish and Fisheries. 2: 146-150.
   

7. 
   

8. Takagi, H., K. Kimoto and T. Fujiki (2022). Photosynthetic carbon assimilation and electron transport rates in two symbiont-bearing planktonic foraminifera. Frontiers in Marine Science, 9: 803354.
   

9. 
   

10. zumida, K., T. Mihiro, R. Fujimaki, Y. Nagai, Y. Oaki, K. Nito, Y. Tanaka, S. Shimode, T. Toyofuku and H. Imai (2022). Characterization of calcite spines of planktonic foraminifers (Globigerinidae). Crystal engineering communications, 24: 2446-2450.
    

11. 
    

12. Owari, Y., F. Nakamura, Y. Oaki, H. Tsuda, S. Shimode and H. Imai (2022). Ultrastructures of setae of a planktonic diatom, Chaetoceros coarctatus. Scientific Reports, 12:7568.
    

13. 
    

14. 矢野光一・梶正彦・下出信次・村上浩・虎谷充浩・Victor S. Kuwahara (2022) 25年ぶりに相模湾で発生した円石藻Gephyrocapsa oceanicaによるブルーム. Bulletin of Plankton Eco-Engineering Research, 2: 24-31.
    

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16. 髙山佳樹・平原南萌・戸田龍樹 (2022). 浮遊性カイアシ類Acartia steueriの幼生・幼体の培養における微細藻類餌料の検討. Bulletin of Plankton Eco-Engineering Research, 2: 32-43.
    

17. 
    

18. 小林真輝・髙山佳樹・下出信次・戸田龍樹・黒沢則夫 (2022). カイアシ類1個体からのDNA抽出法の改良とホルマリン固定期間がミトコンドリア遺伝子のPCR増幅に与える影響. Bulletin of Plankton Eco-Engineering Research, 2: 56-65.
    

19. 
    

20. Shimode, S., T. Yamaguchi and K. Hidaka (2022). Empirical prediction model for egg production rate of a planktonic copepod, Calanus sinicus, estimated from reproductive index using formalin-preserved samples in Sagami Bay, Japan. Plankton & Benthos Research, 17: 301-311.
    

21. 
    

2021年

1. Takayama, Y., M. Hirahara and T. Toda (2021). Bioreactor cultivation of the planktonic copepod Acartia steueri Smirnov for egg collection. Aquaculture Research, 52: 5912-5917.
   

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4. 髙山佳樹・山本翼・戸田龍樹 (2021). 抱卵型カイアシ類Oithona oculataのバイオリアクターを用いた試験的培養. Bulletin of Plankton Eco-Engineering Research, 1: 22-31.
   

5. 
   

2020年

1. Tsuchiya, K., T. Sano, T. Tomioka, A. Kohzu, K. Komatsu, R. Shinohara, S. Shimode, T. Toda and A. Imai (2020). Incorporation characteristics of exogenous 15N-labeled thymidine, deoxyadenosine, deoxyguanosine and deoxycytidine into bacterial DNA. PLoS ONE 15(2): e0229740.
   

2. Kimura, T., M. Takasaki, R. Hatai, Y. Nagai, K. Uematsu, Y. Oaki, M. Osada, H. Tsuda, T. Ishigure, T. Toyofuku, S. Shimode and H. Imai (2020). Guanine crystals regulated by chitin-based honeycomb frameworks for tunable structural colors of sapphirinid copepod, Sapphirina nigromaculata. Scientific Reports. 10: 2266.
   

3. Sugai, Y., K. Tsuchiya, S. Shimode and T. Toda (2020). Photochemical production and biological consumption of CO in the SML of temperate coastal waters and their implications for air-sea CO exchange. Journal of Geophysical Research: Oceans, 125: e2019JC015505.
   

4. Otake, S., K. Takahashi and S. Shimode (2020). Feeding and growth efficiency in a pelagic chaetognath, Zonosagitta nagae reared in the laboratory. Journal of Plankton Research, 42: 265-273.
   

5. Takayama, Y., M. Hirahara, X. Liu, S. Ban and T. Toda (2020). Are egg production and respiration of the calanoid copepod Acartia steueri influenced by high stocking density? Aquaculture Research, 51: 3741-3750.
   

2019年

1. Otake, S., K. Takahashi and S. Shimode (2019). Digestion time and feeding of pelagic chaetognath Zonosagitta nagae in the laboratory. Plankton and Benthos Research,14:39-44.
   

2. Tang, K. W., J.A. Ivory, S. Shimode, Y. Nishibe and K. Takahashi. (2019). Dead heat: copepod carcass occurrence along the Japanese coasts and implications for a warming ocean. ICES Journal of Marine Science,76: 1825-1835.
   

3. Ohnishi, T., J. Hirai, S. Shimode and A. Tsuda (2019). Identification of molecular markers associated with starvation in female Calanus sinicus (Copepoda: Calanoida). Marine Ecology Progress Series, 614: 51-56.
   

4. Nakamura, K., K. Takahashi, S. Shimode, Y. Shimizu and K. Furuya (2019). Effects of container size, density, and incubation period on ammonium excretion rate measurements of planktonic copepods: Validation with a highly sensitive analytical method. Plankton and Benthos Research, 14: 62-70.
   

5. Takayama, Y. and T. Toda (2019). Switch from production of subitaneous to delayed-hatching and diapause eggs in individual copepods, Acartia japonica Mori, 1940 (Copepoda: Calanoida). Regional Studies in Marine Science, 29: 100673.
   

6. Takagi, H., K. Kimoto, T. Fujiki, H. Saito, C. Schmidt, M. Kucera and K. Moriya (2019). Characterizing photosymbiosis in modern planktonic foraminifera. Biogeosciences, 16: 3377-3396.
   

7. Hirata, T., Y. Fujiwara and T. Kikuchi (2019). A new species of Nebalia (Crustacea, Leptostraca) from a hydrothermal field in Kagoshima Bay, Japan. ZooKeys. 897: 1-18.
   

8. 
   

2018年

1. Sugai Y., K. Tsuchiya, S. Shimode and T. Toda (2018). Seasonal variations in microbial abundance and transparent exopolymer particle concentration in the sea surface microlayer of temperate coastal waters. Aquatic Microbial Ecology, 81: 201-211.
   

2. Natori N. and T. Toda (2018). A multi-factor empirical model for calculation of naupliar ingestion rate of the embayment copepod Acartia steueri Smirnov (Copepoda: Calanoida). Marine Biology, 165: 1-11.
   

3. Hirahara, M. and T. Toda (2018). Starvation tolerance of extraordinarily heavy embayment copepod Acartia steueri in Sagami Bay, Japan. Plankton and Benthos Research, 13: 95-103.
   

4. Takayama Y., K. Nakamura, S. Shimode and T. Toda (2018). First record of Acartia japonica Mori, 1940 (Copepoda, Calanoida) from Sagami Bay, the Pacific coast of Japan. Coastal Marine Science 41: 11-14.
   

5. Hirahara, M., Yusoff. Md. F. and T. Toda (2018) High tolerance of the calanoid copepod Acartia steueri to the abrupt food concentration changes in an embayment. Regional Studies in Marine Science, 24: 40-47.
   

6. Kuroyanagi, A., T. Toyofuku, Y. Nagai, K. Kimonoto, H. Nishi, R. Takashima and H. Kawahata (2018). Effect of Euxinic Conditions on Planktic Foraminifers: Culture Experiments and Implications for Past and Future Environments. Paleoceanography and Paleoclimatology, 34: 54-62.
   

7. 
   

2017年

1. Natori, N., M. Kuwata, T. Suzuki and T. Toda (2017). A novel fracturing device to observe the gut contents of copepod nauplii using a scanning electron microscope. Limnology and Oceanography: Methods, 15: 567-571.
   

2. Tsuchiya, K., V. S. Kuwahara, T. Yoshiki, R. Nakajima, S. Shimode, T. Kikuchi and T. Toda (2017). Response of phytoplankton and enhanced biogeochemical activity to an episodic typhoon event in the coastal waters of Japan. Estuarine, Coastal and Shelf Science, 194: 30-39.
   

3. 
   

2016年

1. Sugai, Y., K. Tsuchiya, V.S. Kuwahara, S. Shimode, K. Komatsu, A. Imai and T. Toda (2016). Bacterial growth rate and the relative abundance of bacteria to heterotrophic nanoflagellates in the euphotic and disphotic layers in temperate coastal waters of Sagami Bay, Japan. Journal of Oceanography, 72: 577-587.
   

2. Sogawa, S., H. Sugisaki, H. Saito, Y. Okazaki, T. Ono, S. Shimode and T. Kikuchi (2016). Seasonal and regional change in vertical distribution and diel vertical migration of four euphausiid species (Euphausia pacifica, Thysanoessa inspinata, T. longipes, and Tessarabrachion oculatum) in the northwestern Pacific. Deep-Sea Research I, 106: 1-9.
   

3. Othman, B.H.R., T. Toda and T. Kikuchi (2016). A new species of Nebalia (Crustacea, Leptostraca) from coral reefs at Pulau Payar, Malaysia. ZooKeys, 605: 37-52.
   

4. 
   

2015年

1. 平井惇也・下出信次・栗山美樹子・市川忠史・日高 清隆・津田敦 (2015). 超並列シーケンサーを用いたメタジェネティクスによるカイアシ類の群集構造解析. 日本プランクトン学会報, 62: 73-78.
   

2. Kodama, T., T. Takahashi, K. Nakamura, S. Shimode, T. Yamaguchi and T. Ichikawa (2015). Short-term variation in the Calanus sinicus ammonium excretion rate during the post-capture period. Plankton & Benthos Research, 10: 1-5.
   

3. Kuwahara, V. S. and S. Taguchi (2015). Estimating the diurnal cycle and daily insolation of ultraviolet and photosynthetically active radiation at the sea surface. Journal of Photochemistry and Photobiology, 91: 1103-1111.
   

4. Arai, M., S. Yoneya,a, H. Quan, T. Kikuchi and S. Shimode (2015). Model test of the buoyancy-control type ballast-free ship at sea. 12th International Marine Design Conference 2015 Proceedings Volume 2: 569-577.
   

5. Kuwahara,V. S., S. Nozaki, J. Nakano, T. Toda, T. Kikuchi and S. Taguchi (2015). 18-year variability of ultraviolet radiation penetration in the mid-latitude coastal waters of the western boundary Pacific. Estuarine, Coastal and Shelf Science, 160: 1-9.
   

6. Tsuchiya, K., T. Sano, N. Kawasaki, H. Fukuda, N. Tomioka, K. Hamasaki, Y. Tada, S. Shimode, T. Toda and A. Imai (2015). New radioisotope-free method for measuring bacterial production using [15N5]-2′-deoxyadenosine and liquid chromatography mass spectrometry (LC–MS) in aquatic environments. Journal of Oceanography, 7: 675-683.
   

7. Tsuchiya, K., T. Sano, N. Kawasaki, H. Fukuda, N. Tomioka, K. Hamasaki, Y. Tada, S. Shimode, T. Toda and A. Imai (2015). Typhoon-induced response of phytoplankton and bacteria in temperate coastal waters. Estuarine, Coastal and Shelf Science, 167: 458-465.
   

8. 
   

2014年

1. 菊池知彦・水井涼太・山本真土 (2014) 横浜国立大学における海洋教育の展開. 日本船舶海洋工学会誌,  27:1-5.
   

2. Fujiki, T., H. Takagi, K. Kimoto, A. Kurosawa, T. Yuasa and Y Mino (2014). Assessment of algal photosynthesis in planktic foraminifers by fast repetition rate fluorometry. Journal of Plankton Research, 36: 1403-1407.
   

3. 
   

2013年

1. Hirai, J., S. Shimode and A. Tsuda (2013). Evaluation of ITS2-28S as a molecular marker for identification of calanoid copepods in the subtropical western North Pacific. Journal of Plankton Research, 35: 644-656.
   

2. Tsuchiya, K., T. Yoshiki, R. Nakajima, H. Miyaguchi, V. S. Kuwahara, S. Taguchi, T. Kikuchi and T. Toda (2013). Typhoon-driven variations in primary production and phytoplankton assemblages in Sagami Bay, Japan: A case study of typhoon Mawar (T0511). Plankton & Benthos Research, 8: 74-87.
   

3. 荒井誠・若林康太・菊池知彦・下出信次 (2013). 浮力制御方式バラストフリー船の海水交換性能に関する洋上模型実験について. 日本船舶海洋工学会論文集, 17: 177-184.
   

4. Sogawa, S., H. Sugisaki, H. Saito, Y. Okazaki, S. Shimode and T. Kikuchi (2013). Congruence between euphausiid community and water region in the northwestern Pacific: particularly in the Oyashio–Kuroshio Mixed Water Region. Journal of Oceanography, 69: 71-85.
   

5. Nakatomi, N., M. Hirahara, N. Natori, T. Toda and S. Yamamoto (2013). Change in metabolism and nitrogen isotopic composition of amino acids through egg production of the calanoid copepod Acartia steueri. Research in Organic geochemistry, 29: 61-6.
   

6. 
   

2012年

1. Shimode, S., K. Takahashi, Y. Shimizu, T. Nonomura and T. Tsuda (2012). Distribution and life history of the planktonic copepod, Eucalanus californicus, in the northwestern Pacific: Mechanisms for population maintenance within a high primary production area. Progress in Oceanography, 96: 1-13.
   

2. Kok, S.P, T. Kikuchi, T. Toda and N. Kurosawa (2012). Diversity and community dynamics of protistan microplankton in Sagami Bay revealed by18S rRNA gene clone analysis. Plankton Benthos Research 7: 75-86.
   

3. Aoki, K., S. Yamada, M. Toyokawa, A. Yasuda and T. Kikuchi (2012). Horizontal distribution and growth of moon jelly, Aurelia aurita (sensu lato), in Mikawa Bay, Japan. Coastal Marine Science 35: 103-111.
   

4. Kok, S.P, T. Toda, T. Kikuchi and N. Kurosawa (2012). Diversity analysis of protistan microplankton in Sagami Bay by 18S rRNA gene clone analysis using newly designed PCR primers. Journal of Oceanography 68: 599-613.
   

5. Shimode, S., K. Takahashi, Y. Shimizu, T. Nonomura and T. Tsuda (2012). Distribution and life history of the planktonic copepod, Rhincalanus nasutus and Rhincalanus rostrifrons, in the northwestern Pacific Ocean. Deep Sea Research I, 65: 133-145.
   

6. Sogawa, S., H. Sugisaki, H. Saito, Y. Okazaki, S. Shimode and T. Kikuchi (2012). Congruence between euphausiid community and water region in the northwestern Pacific: particularly in the Oyashio–Kuroshio Mixed Water Region. Journal of Oceanography 67: 209-218.
   

7.